References
- 1.Ač A, Malenovský Z, Olejníčková J, Gallé A, Rascher U and Mohammed G. 2015. Meta-analysis assessing potential of steady-state chlorophyll fluorescence for remote sensing detection of plant water, temperature and nitrogen stress. Remote Sensing of Environment, 168: 420–436
- 2.Agati G. 1998. Response of the in vivo chlorophyll fluorescence spectrum to environmental factors and laser excitation wavelength. Pure and Applied Optics, 7(4): 797–807
- 3.Amoros-Lopez J, Gomez-Chova L, Vila-Frances J, Alonso L, Calpe J, Moreno J and del Valle-Tascon S. 2008. Evaluation of remote sensing of vegetation fluorescence by the analysis of diurnal cycles. International Journal of Remote Sensing, 29(17/18): 5423–5436
- 4.Bauerle W L, Oren R, Way D A, Qian S S, Stoy P C, Thornton P E, Bowden J D, Hoffman F M and Reynolds R F. 2012. Photoperiodic regulation of the seasonal pattern of photosynthetic capacity and the implications for carbon cycling. Proceedings of the National Academy of Sciences of the United States of America, 109(22): 8612–8617
- 5.Breshears D D, Cobb N S, Rich P M, Price K P, Allen C D, Balice R G, Romme W H, Kastens J H, Floyd M L, Belnap J, Anderson J J, Myers O B and Meyer C W. 2005. Regional vegetation die-off in response to global-change-type drought. Proceedings of the National Academy of Sciences of the United States of America, 102(42): 15144–15148
- 6.Cogliati S, Verhoef W, Kraft S, Sabater N, Alonso L, Vicent J, Moreno J, Drusch M and Colombo R. 2015. Retrieval of sun-induced fluorescence using advanced spectral fitting methods. Remote Sensing of Environment, 169: 344–357
- 7.Croft H, Chen J M, Luo X Z, Bartlett P, Chen B and Staebler R M. 2017. Leaf chlorophyll content as a proxy for leaf photosynthetic capacity. Global Change Biology, 23(9): 3513–3524
- 8.Damm A, Elbers J, Erler A, Gioli B, Hamdi K, Hutjes R, Kosvancova M, Meroni M, Miglietta F, Moersch A, Moreno J, Schickling A, Sonnenschein R, Udelhoven T, Van Der Linden S, Hostert P and Rascher U. 2010. Remote sensing of sun-induced fluorescence to improve modeling of diurnal courses of gross primary production (GPP). Global Change Biology, 16(1): 171–186
- 9.Damm A, Guanter L, Paul-Limoges E, van der Tol C, Hueni A, Buchmann N, Eugster W, Ammann C and Schaepman M E. 2015a. Far-red sun-induced chlorophyll fluorescence shows ecosystem-specific relationships to gross primary production: an assessment based on observational and modeling approaches. Remote Sensing of Environment, 166: 91–105
- 10.Damm A, Guanter L, Verhoef W, Schläpfer D, Garbari S and Schaepman M E. 2015b. Impact of varying irradiance on vegetation indices and chlorophyll fluorescence derived from spectroscopy data. Remote Sensing of Environment, 156: 202–215
- 11.Detmers R G, Hasekamp O, Aben I, Houweling S, van Leeuwen T T, Butz A, Landgraf J, Köhler P, Guanter L and Poulter B. 2015. Anomalous carbon uptake in Australia as seen by GOSAT. Geophysical Research Letters, 42(19): 8177–8184
- 12.Di L P, Rundquis D C and Han L H. 1994. Modelling relationships between NDVI and precipitation during vegetative growth cycles. International Journal of Remote Sensing, 15(10): 2121–2136
- 13.Dobrowski S Z, Pushnik J C, Zarco-Tejada P J and Ustin S L. 2005. Simple reflectance indices track heat and water stress-induced changes in steady-state chlorophyll fluorescence at the canopy scale. Remote Sensing of Environment, 97(3): 403–414
- 14.Dragoni D, Schmid H P, Wayson C A, Potter H, Grimmond C S B and Randolph J C. 2011. Evidence of increased net ecosystem productivity associated with a longer vegetated season in a deciduous forest in south-central Indiana, USA. Global Change Biology, 17(2): 886–897
- 15.Du S S, Liu L Y, Liu X J and Hu J C. 2017. Response of canopy solar-induced chlorophyll fluorescence to the absorbed photosynthetically active radiation absorbed by chlorophyll. Remote Sensing, 9(12): 911
- 16.Flexas J, Escalona J M, Evain S, Gulías J, Moya I, Osmond C B and Medrano H. 2002. Steady-state chlorophyll fluorescence (Fs) measurements as a tool to follow variations of net CO2 assimilation and stomatal conductance during water-stress in C3 plants. Physiologia Plantarum, 114(2): 231–240
- 17.Franck F, Juneau P and Popovic R. 2002. Resolution of the Photosystem I and Photosystem II contributions to chlorophyll fluorescence of intact leaves at room temperature. Biochimica et Biophysica Acta (BBA)-Bioenergetics, 1556(2/3): 239–246
- 18.Frankenberg C, Fisher J B, Worden J, Badgley G, Saatchi S S, Lee J E, Toon G C, Butz A, Jung M, Kuze A and Yokota T. 2011. New global observations of the terrestrial carbon cycle from GOSAT: patterns of plant fluorescence with gross primary productivity. Geophysical Research Letters, 38(17): L17706
- 19.Frankenberg C, O’Dell C, Berry J, Guanter L, Joiner J, Köhler P, Pollock R and Taylor T E. 2014. Prospects for chlorophyll fluorescence remote sensing from the Orbiting Carbon Observatory-2. Remote Sensing of Environment, 147: 1–12
- 20.Green J K, Konings A G, Alemohammad S H, Berry J, Entekhabi D, Kolassa J, Lee J E and Gentine P. 2017. Regionally strong feedbacks between the atmosphere and terrestrial biosphere. Nature Geoscience, 10(6): 410–414
- 21.Guan K Y, Berry J A, Zhang Y G, Joiner J, Guanter L, Badgley G and Lobell D B. 2016. Improving the monitoring of crop productivity using spaceborne solar-induced fluorescence. Global Change Biology, 22(2): 716–726
- 22.Guanter L, Aben I, Tol P, Krijger J M, Hollstein A, Köhler P, Damm A, Joiner J, Frankenberg C and Landgraf J. 2015. Potential of the TROPOspheric Monitoring Instrument (TROPOMI) onboard the Sentinel-5 Precursor for the monitoring of terrestrial chlorophyll fluorescence. Atmospheric Measurement Techniques, 8(3): 1337–1352
- 23.Guanter L, Alonso L, Gómez-Chova L, Amorós-López J, Vila J and Moreno J. 2007. Estimation of solar-induced vegetation fluorescence from space measurements. Geophysical Research Letters, 34: L08401
- 24.Guanter L, Alonso L, Gómez-Chova L, Meroni M, Preusker R, Fischer J and Moreno J. 2010. Developments for vegetation fluorescence retrieval from spaceborne high-resolution spectrometry in the O2-A and O2-B absorption bands. Journal of Geophysical Research, 115: D19303
- 25.Guanter L, Frankenberg C, Dudhia A, Lewis P E, Gómez-Dans J, Kuze A, Suto H and Grainger R G. 2012. Retrieval and global assessment of terrestrial chlorophyll fluorescence from GOSAT space measurements. Remote Sensing of Environment, 121: 236–251
- 26.Guanter L, Rossini M, Colombo R, Meroni M, Frankenberg C, Lee J E and Joiner J. 2013. Using field spectroscopy to assess the potential of statistical approaches for the retrieval of sun-induced chlorophyll fluorescence from ground and space. Remote Sensing of Environment, 133: 52–61
- 27.Guanter L, Zhang Y G, Jung M, Joiner J, Voigt M, Berry J A, Frankenberg C, Huete A R, Zarco-Tejada P, Lee J E, Moran M S, Ponce-Campos G, Beer C, Camps-Valls G, Buchmann N, Gianelle D, Klumpp K, Cescatti A, Baker J M and Griffis T J. 2014. Global and time-resolved monitoring of crop photosynthesis with chlorophyll fluorescence. Proceedings of the National Academy of Sciences of the United States of America, 111(14): E1327–E1333
- 28.He L M, Chen J M, Liu J, Mo G and Joiner J. 2017. Angular normalization of GOME-2 Sun-induced chlorophyll fluorescence observation as a better proxy of vegetation productivity. Geophysical Research Letters, 44(11): 5691–5699
- 29.Jeong S J, Schimel D, Frankenberg C, Drewry D T, Fisher J B, Verma M, Berry J A, Lee J E and Joiner J. 2017. Application of satellite solar-induced chlorophyll fluorescence to understanding large-scale variations in vegetation phenology and function over northern high latitude forests. Remote Sensing of Environment, 190: 178–187
- 30.Jeong S J, Ho C H, Choi S D, Kim J, Lee E J and Gim H J. 2013. Satellite data-based phenological evaluation of the nationwide reforestation of South Korea. PLoS One, 8(3): e58900
- 31.Jeong S J, Ho C H, Gim H J and Brown M E. 2011. Phenology shifts at start vs. end of growing season in temperate vegetation over the Northern Hemisphere for the period 1982-2008. Global Change Biology, 17(7): 2385–2399
- 32.Ji L and Peters A J. 2003. Assessing vegetation response to drought in the northern Great Plains using vegetation and drought indices. Remote Sensing of Environment, 87(1): 85–98
- 33.Joiner J, Guanter L, Lindstrot R, Voigt M, Vasilkov A P, Middleton E M, Huemmrich K F, Yoshida Y and Frankenberg C. 2013. Global monitoring of terrestrial chlorophyll fluorescence from moderate-spectral-resolution near-infrared satellite measurements: methodology, simulations, and application to GOME-2. Atmospheric Measurement Techniques, 6(10): 2803–2823
- 34.Joiner J, Yoshida Y, Guanter L and Middleton E M. 2016. New methods for the retrieval of chlorophyll red fluorescence from hyperspectral satellite instruments: simulations and application to GOME-2 and SCIAMACHY. Atmospheric Measurement Techniques, 9: 3939–3967
- 35.Joiner J, Yoshida Y, Vasilkov A P, Middleton E M, Campbell P K E, Yoshida Y, Kuze A and Corp L A. 2012. Filling-in of near-infrared solar lines by terrestrial fluorescence and other geophysical effects: simulations and space-based observations from SCIAMACHY and GOSAT. Atmospheric Measurement Techniques, 5(4): 809–829
- 36.Joiner J, Yoshida Y, Vasilkov A P, Schaefer K, Jung M, Guanter L, Zhang Y, Garrity S, Middleton E M, Huemmrich K F, Gu L and Belelli Marchesini L. 2014. The seasonal cycle of satellite chlorophyll fluorescence observations and its relationship to vegetation phenology and ecosystem atmosphere carbon exchange. Remote Sensing of Environment, 152: 375–391
- 37.Joiner J, Yoshida Y, Vasilkov A P, Yoshida Y, Corp L A and Middleton E M. 2011. First observations of global and seasonal terrestrial chlorophyll fluorescence from space. Biogeosciences, 8(3): 637–651
- 38.Knyazikhin Y, Schull M A, Stenberg P, Mottus M, Rautiainen M, Yang Y, Marshak A, Latorre Carmona P, Kaufmann R K, Lewis P, Disney M I, Vanderbilt V, Davis A B, Baret F, Jacquemoud S, Lyapustin A and Myneni R B. 2013. Hyperspectral remote sensing of foliar nitrogen content. Proceedings of the National Academy of Sciences of the United States of America, 110(3): E185–E192
- 39.Koffi E N, Rayner P J, Norton A J, Frankenberg C and Scholze M. 2015. Investigating the usefulness of satellite derived fluorescence data in inferring gross primary productivity within the carbon cycle data assimilation system. Biogeosciences, 12(13): 4067–4084
- 40.Köhler P, Guanter L and Joiner J. 2015. A linear method for the retrieval of sun-induced chlorophyll fluorescence from GOME-2 and SCIAMACHY data. Atmospheric Measurement Techniques, 8(6): 2589–2608
- 41.Krumov A, Nikolova A, Vassilev V and Vassilev N. 2008. Assessment of plant vitality detection through fluorescence and reflectance imagery. Advances in Space Research, 41(11): 1870–1875
- 42.Lee J E, Berry J A, van der Tol C, Yang X, Guanter L, Damm A, Baker I and Frankenberg C. 2015. Simulations of chlorophyll fluorescence incorporated into the Community Land Model version 4. Global Change Biology, 21(9): 3469–3477
- 43.Lee J E, Frankenberg C, van der Tol C, Berry J A, Guanter L, Boyce C K, Fisher J B, Morrow E, Worden J R, Asefi S, Badgley G and Saatchi S. 2013. Forest productivity and water stress in Amazonia: observations from GOSAT chlorophyll fluorescence. Proceedings of the Royal Society B: Biological Sciences, 280(1761): 20130171
- 44.Liu J J, Bowman K W, Schimel D S, Parazoo N C, Jiang Z, Lee M, Bloom A A, Wunch D, Frankenberg C, Sun Y, O’Dell C W, Gurney K R, Menemenlis D, Gierach M, Crisp D and Eldering A. 2017. Contrasting carbon cycle responses of the tropical continents to the 2015-2016 El Niño. Science, 358(6360): eaam5690
- 45.Liu X J, Liu L Y, Zhang S and Zhou X F. 2015. New spectral fitting method for full-spectrum solar-induced chlorophyll fluorescence retrieval based on principal components analysis. Remote Sensing, 7(8): 10626–10645
- 46.Luus K A, Commane R, Parazoo N C, Benmergui J, Euskirchen E S, Frankenberg C, Joiner J, Lindaas J, Miller C E, Oechel W C, Zona D, Wofsy S and Lin J C. 2017. Tundra photosynthesis captured by satellite-observed solar-induced chlorophyll fluorescence. Geophysical Research Letters, 44(3): 1564–1573
- 47.Mazzoni M, Meroni M, Fortunato C, Colombo R and Verhoef W. 2012. Retrieval of maize canopy fluorescence and reflectance by spectral fitting in the O2–A absorption band. Remote Sensing of Environment, 124: 72–82
- 48.Medrano H, Escalona J M, Bota J, Gulías J and Flexas J. 2002. Regulation of photosynthesis of C3 plants in response to progressive drought: stomatal conductance as a reference parameter. Annals of Botany, 89(7): 895–905
- 49.Meroni M, Picchi V, Rossini M, Cogliati S, Panigada C, Nali C, Lorenzini G and Colombo R. 2008. Leaf level early assessment of ozone injuries by passive fluorescence and photochemical reflectance index. International Journal of Remote Sensing, 29(17/18): 5409–5422
- 50.Meroni M, Rossini M, Guanter L, Alonso L, Rascher U, Colombo R and Moreno J. 2009. Remote sensing of solar-induced chlorophyll fluorescence: review of methods and applications. Remote Sensing of Environment, 113(10): 2037–2051
- 51.Monteith J L. 1972. Solar radiation and productivity in tropical ecosystems. The Journal of Applied Ecology, 9(3): 747–766
- 52.Neuner G and Larcher W. 1990. Determination of differences in chilling susceptibility of two soybean varieties by means of in vivo chlorophyll fluorescence measurements. Journal of Agronomy and Crop Science, 164(2): 73–80
- 53.Norton A J, Rayner P J, Koffi E N and Scholze M. 2017. Assimilating solar-induced chlorophyll fluorescence into the terrestrial biosphere model BETHY-SCOPE: model description and information content. Geoscientific Model Development: 1–26
- 54.Parazoo N C, Bowman K, Frankenberg C, Lee J E, Fisher J B, Worden J, Jones D B A, Berry J, Collatz G J, Baker I T, Jung M, Liu J J, Osterman G, O’Dell C, Sparks At, Butz A, Guerlet S, Yoshida Y, Chen H L and Gerbig C. 2013. Interpreting seasonal changes in the carbon balance of southern Amazonia using measurements of XCO2 and chlorophyll fluorescence from GOSAT. Geophysical Research Letters, 40(11): 2829–2833
- 55.Perez-Priego O, Zarco-Tejada P J, Miller J R, Sepulcre-Canto G and Fereres E. 2005. Detection of water stress in orchard trees with a high-resolution spectrometer through chlorophyll fluorescence in-filling of the O2-A band. IEEE Transactions on Geoscience and Remote Sensing, 43(12): 2860–2869
- 56.Piao S L, Ciais P, Friedlingstein P, Peylin P, Reichstein M, Luyssaert S, Margolis H, Fang J Y, Barr A, Chen A P, Grelle A, Hollinger D Y, Laurila T, Lindroth A, Richardson A D and Vesala T. 2008. Net carbon dioxide losses of northern ecosystems in response to autumn warming. Nature, 451(7174): 49–52
- 57.Piao S L, Mohammat A, Fang J Y, Cai Q and Feng J M. 2006. NDVI-based increase in growth of temperate grasslands and its responses to climate changes in China. Global Environmental Change, 16(4): 340–348
- 58.Plascyk J A and Gabriel F C. 1975. The fraunhofer line discriminator MKII-An airborne instrument for precise and standardized ecological luminescence measurement. IEEE Transactions on Instrumentation and Measurement, 24(4): 306–313
- 59.Porcar-Castell A, Tyystjärvi E, Atherton J, van der Tol C, Flexas J, Pfündel E E, Moreno J, Frankenberg C and Berry J A. 2014. Linking chlorophyll a fluorescence to photosynthesis for remote sensing applications: mechanisms and challenges. Journal of Experimental Botany, 65(15): 4065–4095
- 60.Rathcke B and Lacey E P. 1985. Phenological patterns of terrestrial plants. Annual Review of Ecology and Systematics, 16(1): 179–214
- 61.Richardson A D, Hollinger D Y, Dail D B, Lee J T, Munger J W and O’Keefe J. 2009. Influence of spring phenology on seasonal and annual carbon balance in two contrasting New England forests. Tree Physiology, 29(3): 321–331
- 62.Rossini M, Nedbal L, Guanter L, Ač A, Alonso L, Burkart A, Cogliati S, Colombo R, Damm A, Drusch M, Hanus J, Janoutova R, Julitta T, Kokkalis P, Moreno J, Novotny J, Panigada C, Pinto F, Schickling A, Schüttemeyer D, Zemek F and Rascher U. 2015. Red and far red Sun-induced chlorophyll fluorescence as a measure of plant photosynthesis. Geophysical Research Letters, 42(6): 1632–1639
- 63.Sanders A F J, Verstraeten W W, Kooreman M L, van Leth T C, Beringer J and Joiner J. 2016. Spaceborne sun-induced vegetation fluorescence time series from 2007 to 2015 evaluated with australian flux tower measurements. Remote Sensing, 8(12): 895
- 64.Shen M G, Tang Y H, Desai A R, Gough C and Chen J. 2014. Can EVI-derived land-surface phenology be used as a surrogate for phenology of canopy photosynthesis?. International Journal of Remote Sensing, 35(3): 1162–1174
- 65.Sun Y, Fu R, Dickinson R, Joiner J, Frankenberg C, Gu L H, Xia Y L and Fernando N. 2015. Drought onset mechanisms revealed by satellite solar-induced chlorophyll fluorescence: insights from two contrasting extreme events. Journal of Geophysical Research: Biogeosciences, 120(11): 2427–2440
- 66.Sun Y, Frankenberg C, Wood J D, Schimel D S, Jung M, Guanter L, Drewry D T, Verma M, Porcar-Castell A, Griffis T J, Gu L, Magney T S, Köhler P, Evans B and Yuen K. 2017. OCO-2 advances photosynthesis observation from space via solar-induced chlorophyll fluorescence. Science, 358(6360): eaam5747
- 67.Thum T, Zaehle S, Köhler P, Aalto T, Aurela M, Guanter L, Kolari P, Laurila T, Lohila A, Magnani F, Van der Tol C and Markkanen T. 2017. Modelling sun-induced fluorescence and photosynthesis with a land surface model at local and regional scales in northern Europe. Biogeosciences, 14(7): 1969–1987
- 68.Walther S, Voigt M, Thum T, Gonsamo A, Zhang YvG, Köhler P, Jung M, Varlagin A and Guanter L. 2016. Satellite chlorophyll fluorescence measurements reveal large-scale decoupling of photosynthesis and greenness dynamics in boreal evergreen forests. Global Change Biology, 22(9): 2979–2996
- 69.Wang R, Liu Z G, and Yang P Q. 2012. Principle and progress in remote sensing of vegetation solar-induced chlorophyll fluorescence. Advances in Earth Science, 27(11): 1221–1228 (
- 70.Wang S H, Huang C P, Zhang L F, Lin Y, Cen Y and Wu T X. 2016. Monitoring and assessing the 2012 drought in the great plains: analyzing satellite-retrieved solar-induced chlorophyll fluorescence, drought indices, and gross primary production. Remote Sensing, 8(2): 61
- 71.White M A, De Beurs K M, Didan K, Inouye D W, Richardson A D, Jensen O P, O’Keefe J, Zhang G, Nemani R R, Van Leeuwen W J D, Brown J F, De Wit A, Schaepman M, Lin X M, Dettinger M, Bailey A S, Kimball J, Schwartz M D, Baldocchi D D, Lee J T and Lauenroth W K. 2009. Intercomparison, interpretation, and assessment of spring phenology in North America estimated from remote sensing for 1982-2006. Global Change Biology, 15(10): 2335–2359
- 72.Wolanin A, Rozanov V V, Dinter T, Noël S, Vountas M, Burrows J P and Bracher A. 2015. Global retrieval of marine and terrestrial chlorophyll fluorescence at its red peak using hyperspectral top of atmosphere radiance measurements: feasibility study and first results. Remote Sensing of Environment, 166: 243–261
- 73.Yang W, Yang L and Merchant J W. 1997. An assessment of AVHRR/NDVI-ecoclimatological relations in Nebraska, U. S.A. International Journal of Remote Sensing, 18(10): 2161–2180
- 74.Yang X, Tang J W, Mustard J F, Lee J E, Rossini M, Joiner J, Munger J W, Kornfeld A and Richardson A D. 2015. Solar-induced chlorophyll fluorescence that correlates with canopy photosynthesis on diurnal and seasonal scales in a temperate deciduous forest. Geophysical Research Letters, 42(8): 2977–2987
- 75.Yoshida Y, Joiner J, Tucker C, Berry J, Lee J E, Walker G, Reichle R, Koster R, Lyapustin A and Wang Y. 2015. The 2010 Russian drought impact on satellite measurements of solar-induced chlorophyll fluorescence: insights from modeling and comparisons with parameters derived from satellite reflectances. Remote Sensing of Environment, 166: 163–177
- 76.Zarco-Tejada P J, Morales A, Testi L and Villalobos F J. 2013. Spatio-temporal patterns of chlorophyll fluorescence and physiological and structural indices acquired from hyperspectral imagery as compared with carbon fluxes measured with eddy covariance. Remote Sensing of Environment, 133: 102–115
- 77.Zhang Y G, Guanter L, Berry J A, Joiner J, van der Tol C, Huete A, Gitelson A, Voigt M and Köhler P. 2014. Estimation of vegetation photosynthetic capacity from space-based measurements of chlorophyll fluorescence for terrestrial biosphere models. Global Change Biology, 20(12): 3727–3742
- 78.Zhang Y G, Guanter L, Berry J A, van der Tol C, Yang X, Tang J W and Zhang F M. 2016. Model-based analysis of the relationship between sun-induced chlorophyll fluorescence and gross primary production for remote sensing applications. Remote Sensing of Environment, 187: 145–155
- 79.Zhang Y J, Liu L Y, Hou M Y, Liu L T and Li C D. 2009. Progress in remote sensing of vegetation chlorophyll fluorescence. Journal of Remote Sensing, 13(5): 963–978 (


